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@mgxd mgxd commented Jun 10, 2025

Closes #466 - this allows users to set an environment variable NIBABIES_POOCH_DIR to set a custom location to load/save the intermediate template registrations.

Also went ahead and made it an interface rather than an untested function.

@mgxd mgxd marked this pull request as ready for review June 10, 2025 23:28
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codecov bot commented Jun 10, 2025

Codecov Report

❌ Patch coverage is 97.95918% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 57.14%. Comparing base (ec18eaf) to head (34195b9).
⚠️ Report is 44 commits behind head on master.

Files with missing lines Patch % Lines
nibabies/workflows/anatomical/registration.py 0.00% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##           master     #467      +/-   ##
==========================================
+ Coverage   56.74%   57.14%   +0.39%     
==========================================
  Files          70       72       +2     
  Lines        6788     6823      +35     
  Branches      831      831              
==========================================
+ Hits         3852     3899      +47     
+ Misses       2727     2715      -12     
  Partials      209      209              

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@mgxd mgxd merged commit e93a3ac into master Jun 11, 2025
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@mgxd mgxd deleted the enh/pooch-cache branch June 11, 2025 16:32
mgxd added a commit that referenced this pull request Jun 24, 2025
25.1.0 (June 24, 2025)

First release of the 25.1.x series. A few key changes include a new workflow
for derivatives compatibility when an anatomical template is not present, and performing
a two step registration (currently only for MNI152NLin6Asym) is now the default behavior.
This can be disabled by adding `--no-multi-step-reg` to the command.

- Enhancements
  * ENH: Verify derivatives are compatible with anatomical reference (#459)
  * ENH: Make `--multi-step-reg` a boolean action, enable by default (#470)
  * ENH: Convert pooch retrieval to interface, allow setting cache dir (#467)

- Internals / Maintenance
  * MAINT: bump dependencies, test on python 3.13 (#468)
  * MAINT: deprecate `--clean-workdir` (#473)
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