apply rshiny-template to repo

.bumpversion.cfg

@@ -0,0 +1,8 @@
+[bumpversion]
+current_version = 4.0.0
+commit = False
+tag = False
+
+[bumpversion:file:DESCRIPTION]
+
+[bumpversion:file:app/global.R]

.gitattributes

@@ -0,0 +1,127 @@
+# These settings are for any web project
+
+# Handle line endings automatically for files detected as text
+# and leave all files detected as binary untouched.
+* text=auto eol=lf
+
+#
+# The above will handle all files NOT found below
+#
+
+#
+## These files are text and should be normalized (Convert crlf => lf)
+#
+
+# source code
+*.php text
+*.css text
+*.sass text
+*.scss text
+*.less text
+*.styl text
+*.js text
+*.ts text
+*.coffee text
+*.json text
+*.htm text
+*.html text
+*.xml text
+*.txt text
+*.ini text
+*.inc text
+*.pl text
+*.rb text
+*.py text
+*.scm text
+*.sql text
+*.sh text eof=LF
+*.bat text
+
+# templates
+*.hbt text
+*.jade text
+*.haml text
+*.hbs text
+*.dot text
+*.tmpl text
+*.phtml text
+
+# server config
+.htaccess text
+
+# git config
+.gitattributes text
+.gitignore text
+
+# code analysis config
+.jshintrc text
+.jscsrc text
+.jshintignore text
+.csslintrc text
+
+# misc config
+*.yaml text
+*.yml text
+.editorconfig text
+
+# build config
+*.npmignore text
+*.bowerrc text
+Dockerfile text eof=LF
+
+# Heroku
+Procfile text
+.slugignore text
+
+# Documentation
+*.md text
+LICENSE text
+AUTHORS text
+
+
+#
+## These files are binary and should be left untouched
+#
+
+# (binary is a macro for -text -diff)
+*.png binary
+*.jpg binary
+*.jpeg binary
+*.gif binary
+*.ico binary
+*.mov binary
+*.mp4 binary
+*.mp3 binary
+*.flv binary
+*.fla binary
+*.swf binary
+*.gz binary
+*.zip binary
+*.7z binary
+*.ttf binary
+*.pyc binary
+*.pdf binary
+
+# Source files
+# ============
+*.pxd		text
+*.py 		text
+*.py3 		text
+*.pyw 		text
+*.pyx  		text
+*.sh        text eol=lf
+*.json      text
+
+# Binary files
+# ============
+*.db		binary
+*.p 		binary
+*.pkl 		binary
+*.pyc 		binary
+*.pyd		binary
+*.pyo 		binary
+
+# Note: .db, .p, and .pkl files are associated
+# with the python modules ``pickle``, ``dbm.*``,
+# ``shelve``, ``marshal``, ``anydbm``, & ``bsddb``
+# (among others).

.github/release-drafter.yml

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+name-template: "v$RESOLVED_VERSION"
+tag-template: "v$RESOLVED_VERSION"
+categories:
+  - title: "📚 Content Changes"
+    labels:
+      - "blog"
+      - "content"
+  - title: "🚀 Features"
+    labels:
+      - "enhancement"
+      - "feature"
+  - title: "🐛 Bugs Fixes"
+    labels:
+      - "bug"
+  - title: "📕 Documentation"
+    labels:
+      - "documentation"
+  - title: "🧰 Development"
+    labels:
+      - "chore"
+      - "documentation"
+      - "dependencies"
+change-template: "- #$NUMBER $TITLE"
+change-title-escapes: '\<*_&`#@'
+template: |
+  $CHANGES
+
+  Thanks to $CONTRIBUTORS

.github/workflows/ci.yaml

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+name: ci
+
+on: push
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v2
+      - uses: r-lib/actions/setup-r@v1
+        with:
+          use-public-rspm: true
+      - uses: r-lib/actions/setup-r-dependencies@v1
+      - name: Style / Format
+        shell: Rscript {0}
+        run: styler::style_dir(dry="fail")
+      - name: Lint
+        shell: Rscript {0}
+        run: |
+          lintr::lint_dir('.')
+
+  image:
+    needs: build
+    # only on main and dev branch
+    if: startsWith(github.ref, 'refs/heads/main') || github.ref == 'refs/heads/dev'
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out code
+        uses: actions/checkout@v2
+      - name: Login to GitHub Container Registry
+        uses: docker/login-action@v1
+        with:
+          registry: ghcr.io
+          username: cmu-delphi-deploy-machine
+          password: ${{ secrets.CMU_DELPHI_DEPLOY_MACHINE_PAT }}
+      - name: Build Image
+        env:
+          DEVOPS_DOCKER_FILE: ./devops/Dockerfile
+        run: |
+          docker build -t repo --file ${DEVOPS_DOCKER_FILE} .
+      - name: Resolve Tag
+        id: tagname
+        run: |
+          baseRef="${GITHUB_REF#*/}"
+          imageTag="${baseRef#*/}"
+          if [ "$imageTag" = "main" ] ; then
+            imageTag="latest"
+          fi
+          echo "::set-output name=tag::$imageTag"
+          echo "::set-output name=repo::ghcr.io/${{ github.repository }}"
+      - name: Push Dev Tag
+        run: |
+          docker tag repo ${{ steps.tagname.outputs.repo }}:${{ steps.tagname.outputs.tag }}
+          docker push ${{ steps.tagname.outputs.repo }}:${{ steps.tagname.outputs.tag }}
+      - name: Set up Python 3.8
+        if: startsWith(github.ref, 'refs/heads/main')
+        uses: actions/setup-python@v2
+        with:
+          python-version: 3.8
+      - name: Extract version
+        if: startsWith(github.ref, 'refs/heads/main')
+        id: extract_version
+        run: |
+          python -m pip install bump2version
+          echo -n "::set-output name=version::"
+          bump2version --dry-run --list patch | grep ^current_version | sed -r s,"^.*=",,
+      - name: Trigger Webhook
+        run: |
+          # trigger a webhook update
+          curl -H "Authorization: Bearer ${{ secrets.DELPHI_DEPLOY_WEBHOOK_TOKEN }}" \
+               -X POST ${{ secrets.DELPHI_DEPLOY_WEBHOOK_URL }} \
+               -H "Content-Type: application/x-www-form-urlencoded" \
+               -d "repository=${{ steps.tagname.outputs.repo }}&tag=${{ steps.tagname.outputs.tag }}"
+      - name: Push Version Tag Tag
+        if: startsWith(github.ref, 'refs/heads/main')
+        run: |
+          docker tag repo ${{ steps.tagname.outputs.repo }}:v${{ steps.extract_version.outputs.version }}
+          docker push ${{ steps.tagname.outputs.repo }}:v${{ steps.extract_version.outputs.version }}

.github/workflows/create_release.yml

@@ -0,0 +1,43 @@
+name: Create Release
+on:
+  workflow_dispatch:
+    inputs:
+      versionName:
+        description: "Semantic Version Number (i.e., 5.5.0 or patch, minor, major, prepatch, preminor, premajor, prerelease)"
+        required: true
+        default: patch
+jobs:
+  create_release:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out code
+        uses: actions/checkout@v2
+        with:
+          ref: main
+          ssh-key: ${{ secrets.CMU_DELPHI_DEPLOY_MACHINE_SSH }}
+      - name: Reset main branch
+        run: |
+          git fetch origin dev:dev
+          git reset --hard dev
+      - name: Set up Python 3.8
+        uses: actions/setup-python@v2
+        with:
+          python-version: 3.8
+      - name: Change version number
+        id: version
+        run: |
+          python -m pip install bump2version
+          echo -n "::set-output name=next_tag::"
+          bump2version --list ${{ github.event.inputs.versionName }} | grep new_version | sed -r s,"^.*=",,
+      - name: Create pull request into main
+        uses: peter-evans/create-pull-request@v3
+        with:
+          branch: release/${{ steps.version.outputs.next_tag }}
+          commit-message: "chore: release ${{ steps.version.outputs.next_tag }}"
+          base: main
+          title: Release ${{ steps.version.outputs.next_tag }}
+          labels: chore
+          reviewers: krivard
+          assignees: krivard
+          body: |
+            Releasing ${{ steps.version.outputs.next_tag }}.