Improvements to brun_fastsurfer.sh #640
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brun_fastsurfer can now schedule segmentation for multiple GPUs, and parallel segmentation. It is much cleaner now and ready to be extended for longitudinal processing as well. This issue also fixed the one case failing terminates the entire brun processing run and adds `--threads surf=n` and `--threads seg=n` options for run_fastsurfer to enable better control over threads.
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Add parallelization features to brun_fastsurfer.sh
brun_fastsurfer can now schedule segmentation for multiple GPUs, and parallel segmentation.
It is much cleaner now and ready to be extended for longitudinal processing as well.
This issue also fixed the one case failing terminates the entire brun processing run and adds
--threads surf=nand--threads seg=noptions for run_fastsurfer to enable better control over threads.Also fixes #620