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1. openvax/pyensembl openvax/pyensembl Public

   Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl

   Python 398 70

2. hammerlab/cohorts hammerlab/cohorts Public

   Utilities for analyzing mutations and neoepitopes in patient cohorts

   Python 20 4

3. openvax/mhctools openvax/mhctools Public

   Python interface to running command-line and web-based MHC binding predictors

   Python 99 24

4. hammerlab/discohorts hammerlab/discohorts Public

   Generate Cohorts based on Epidisco and/or Biokepi results

   Python 1

5. openvax/topiary openvax/topiary Public

   Predict mutated T-cell epitopes from sequencing data

   Python 30 9

6. hyper hyper Public

   Automatically populate Google Docs with data from arbitrary URLs

   Jupyter Notebook 6