GAP interface broken after CTRL-C

[wdjoyner]

For example (you need to hit CTRL-C pretty quickly to beat the first line...):

sage: gap.eval('B := ExtendedBinaryGolayCode();')
^CInterrupting Gap...
---------------------------------------------------------------------------
KeyboardInterrupt                         Traceback (most recent call last)

/Users/rlmill/sage-3.0.6/<ipython console> in <module>()

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in eval(self, x, newlines, strip)
    307         if len(x) == 0 or x[len(x) - 1] != ';':
    308             x += ';'
--> 309         s = Expect.eval(self, x)
    310         if newlines:
    311             return s

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in eval(self, code, strip, synchronize, **kwds)
    915         try:
    916             with gc_disabled():
--> 917                 return '\n'.join([self._eval_line(L, **kwds) for L in code.split('\n') if L != ''])
    918         except KeyboardInterrupt:
    919             # DO NOT CATCH KeyboardInterrupt, as it is being caught

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _eval_line(self, line, allow_use_file, wait_for_prompt)
    511 
    512         except KeyboardInterrupt:
--> 513             self._keyboard_interrupt()
    514             raise KeyboardInterrupt, "Ctrl-c pressed while running %s"%self
    515 #        i = out.find("\n")

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _keyboard_interrupt(self)
    448         print "Interrupting %s..."%self
    449         os.killpg(self._expect.pid, 2)
--> 450         raise KeyboardInterrupt, "Ctrl-c pressed while running %s"%self
    451 
    452     def _eval_line_using_file(self, line):

KeyboardInterrupt: Ctrl-c pressed while running Gap

Now we try to do something else using GAP:

sage: C = ReedSolomonCode(4,3,GF(5)); C
Linear code of length 4, dimension 3 over Finite Field of size 5
sage: C.minimum_distance()
---------------------------------------------------------------------------
RuntimeError                              Traceback (most recent call last)

/Users/rlmill/sage-3.0.6/<ipython console> in <module>()

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/coding/linear_code.py in minimum_distance(self)
   1366         q = F.order()
   1367         G = self.gen_mat()
-> 1368         gapG = gap(G)
   1369         Gstr = "%s*Z(%s)^0"%(gapG, q)
   1370         return hamming_weight(min_wt_vec(Gstr,F))

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in __call__(self, x, name)
    945             return cls(self, x, name=name)
    946         try:
--> 947             return self._coerce_from_special_method(x)
    948         except TypeError:
    949             raise

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in _coerce_from_special_method(self, x)
    969             s = '_gp_'
    970         try:
--> 971             return (x.__getattribute__(s))(self)
    972         except AttributeError:
    973             return self(x._interface_init_())

/Users/rlmill/sage-3.0.6/sage_object.pyx in sage.structure.sage_object.SageObject._gap_ (sage/structure/sage_object.c:2456)()

/Users/rlmill/sage-3.0.6/sage_object.pyx in sage.structure.sage_object.SageObject._interface_ (sage/structure/sage_object.c:2082)()

/Users/rlmill/sage-3.0.6/matrix1.pyx in sage.matrix.matrix1.Matrix._gap_init_ (sage/matrix/matrix1.c:1447)()

/Users/rlmill/sage-3.0.6/integer_mod.pyx in sage.rings.integer_mod.IntegerMod_abstract._gap_init_ (sage/rings/integer_mod.c:3315)()

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in eval(self, x, newlines, strip)
    307         if len(x) == 0 or x[len(x) - 1] != ';':
    308             x += ';'
--> 309         s = Expect.eval(self, x)
    310         if newlines:
    311             return s

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in eval(self, code, strip, synchronize, **kwds)
    915         try:
    916             with gc_disabled():
--> 917                 return '\n'.join([self._eval_line(L, **kwds) for L in code.split('\n') if L != ''])
    918         except KeyboardInterrupt:
    919             # DO NOT CATCH KeyboardInterrupt, as it is being caught

/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _eval_line(self, line, allow_use_file, wait_for_prompt)
    508                         return ''
    509                 else:
--> 510                     raise RuntimeError, message
    511 
    512         except KeyboardInterrupt:

RuntimeError: Gap produced error output
user interrupt while printing

   executing Int(Z(5));

Component: interfaces

Issue created by migration from https://trac.sagemath.org/ticket/3294

[wdjoyner]

comment:2

This is wrong and I don't know how to close the ticket. What is true, at least on my machine, is that if you stop the command using ctl-C the restart it then the above happens. That might be a bug in the GAP interface, I don't know.

Sorry for the false alarm.

[sagetrac-mabshoff]

comment:3

This is still a bug then and somebody should come up with a better title then.

Cheers,

Michael

[wdjoyner]

comment:4

It breaks over all fields. This is after a GAP computation was stopped using ctl-C:

sage: C = HammingCode(3,GF(2))
sage: C
Linear code of length 7, dimension 4 over Finite Field of size 2
sage: C.minimum_distance()
---------------------------------------------------------------------------
RuntimeError                              Traceback (most recent call last)

/home/wdj/sagefiles/sage-3.0.2.rc3/<ipython console> in <module>()

/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/coding/linear_code.py in minimum_distance(self)
   1366         q = F.order()
   1367         G = self.gen_mat()
-> 1368         gapG = gap(G)
   1369         Gstr = "%s*Z(%s)^0"%(gapG, q)
   1370         return hamming_weight(min_wt_vec(Gstr,F))

/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/expect.py in __call__(self, x)
    948             return cls(self, x)
    949         try:
--> 950             return self._coerce_from_special_method(x)
    951         except TypeError:
    952             raise

/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/expect.py in _coerce_from_special_method(self, x)
    972             s = '_gp_'
    973         try:
--> 974             return (x.__getattribute__(s))(self)
    975         except AttributeError:
    976             return self(x._interface_init_())

/home/wdj/sagefiles/sage-3.0.2.rc3/sage_object.pyx in sage.structure.sage_object.SageObject._gap_ (sage/structure/sage_object.c:2257)()

/home/wdj/sagefiles/sage-3.0.2.rc3/sage_object.pyx in sage.structure.sage_object.SageObject._interface_ (sage/structure/sage_object.c:1884)()

/home/wdj/sagefiles/sage-3.0.2.rc3/matrix1.pyx in sage.matrix.matrix1.Matrix._gap_init_ (sage/matrix/matrix1.c:1287)()

/home/wdj/sagefiles/sage-3.0.2.rc3/integer_mod.pyx in sage.rings.integer_mod.IntegerMod_abstract._gap_init_ (sage/rings/integer_mod.c:3124)()

/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/gap.py in eval(self, x, newlines, strip)
    307         if len(x) == 0 or x[len(x) - 1] != ';':
    308             x += ';'
--> 309         s = Expect.eval(self, x)
    310         if newlines:
    311             return s

/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/expect.py in eval(self, code, strip, synchronize, **kwds)
    915         try:
    916             with gc_disabled():
--> 917                 return '\n'.join([self._eval_line(L, **kwds) for L in code.split('\n') if L != ''])
    918         except KeyboardInterrupt:
    919             # DO NOT CATCH KeyboardInterrupt, as it is being caught

/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _eval_line(self, line, allow_use_file, wait_for_prompt)
    508                         return ''
    509                 else:
--> 510                     raise RuntimeError, message
    511
    512         except KeyboardInterrupt:

RuntimeError: Unexpected EOF from Gap executing Int(Z(2));
sage:  

[rlmill]

comment:5

Yes, the GAP interface needs a kick after using CTRL-C.

[rlmill]

Description changed:

--- 
+++ 
@@ -1,69 +1,107 @@
-This seems to be caused by a change in the interface to GAP. Related methods
-(like spectrum) are also broken.
+For example (you need to hit CTRL-C pretty quickly to beat the first line...):
+
+```
+sage: gap.eval('B := ExtendedBinaryGolayCode();')
+^CInterrupting Gap...
+---------------------------------------------------------------------------
+KeyboardInterrupt                         Traceback (most recent call last)
+
+/Users/rlmill/sage-3.0.6/<ipython console> in <module>()
+
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in eval(self, x, newlines, strip)
+    307         if len(x) == 0 or x[len(x) - 1] != ';':
+    308             x += ';'
+--> 309         s = Expect.eval(self, x)
+    310         if newlines:
+    311             return s
+
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in eval(self, code, strip, synchronize, **kwds)
+    915         try:
+    916             with gc_disabled():
+--> 917                 return '\n'.join([self._eval_line(L, **kwds) for L in code.split('\n') if L != ''])
+    918         except KeyboardInterrupt:
+    919             # DO NOT CATCH KeyboardInterrupt, as it is being caught
+
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _eval_line(self, line, allow_use_file, wait_for_prompt)
+    511 
+    512         except KeyboardInterrupt:
+--> 513             self._keyboard_interrupt()
+    514             raise KeyboardInterrupt, "Ctrl-c pressed while running %s"%self
+    515 #        i = out.find("\n")
+
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _keyboard_interrupt(self)
+    448         print "Interrupting %s..."%self
+    449         os.killpg(self._expect.pid, 2)
+--> 450         raise KeyboardInterrupt, "Ctrl-c pressed while running %s"%self
+    451 
+    452     def _eval_line_using_file(self, line):
+
+KeyboardInterrupt: Ctrl-c pressed while running Gap
+```
+
+Now we try to do something else using GAP:
 
 ```
 sage: C = ReedSolomonCode(4,3,GF(5)); C
 Linear code of length 4, dimension 3 over Finite Field of size 5
-sage: C.gen_mat()
-
-[1 1 1 1]
-[0 1 2 3]
-[0 1 4 4]
 sage: C.minimum_distance()
 ---------------------------------------------------------------------------
 RuntimeError                              Traceback (most recent call last)
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/<ipython console> in <module>()
+/Users/rlmill/sage-3.0.6/<ipython console> in <module>()
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/coding/linear_code.py in minimum_distance(self)
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/coding/linear_code.py in minimum_distance(self)
    1366         q = F.order()
    1367         G = self.gen_mat()
 -> 1368         gapG = gap(G)
    1369         Gstr = "%s*Z(%s)^0"%(gapG, q)
    1370         return hamming_weight(min_wt_vec(Gstr,F))
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/expect.py in __call__(self, x)
-    948             return cls(self, x)
-    949         try:
---> 950             return self._coerce_from_special_method(x)
-    951         except TypeError:
-    952             raise
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in __call__(self, x, name)
+    945             return cls(self, x, name=name)
+    946         try:
+--> 947             return self._coerce_from_special_method(x)
+    948         except TypeError:
+    949             raise
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/expect.py in _coerce_from_special_method(self, x)
-    972             s = '_gp_'
-    973         try:
---> 974             return (x.__getattribute__(s))(self)
-    975         except AttributeError:
-    976             return self(x._interface_init_())
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in _coerce_from_special_method(self, x)
+    969             s = '_gp_'
+    970         try:
+--> 971             return (x.__getattribute__(s))(self)
+    972         except AttributeError:
+    973             return self(x._interface_init_())
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/sage_object.pyx in sage.structure.sage_object.SageObject._gap_ (sage/structure/sage_object.c:2257)()
+/Users/rlmill/sage-3.0.6/sage_object.pyx in sage.structure.sage_object.SageObject._gap_ (sage/structure/sage_object.c:2456)()
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/sage_object.pyx in sage.structure.sage_object.SageObject._interface_ (sage/structure/sage_object.c:1884)()
+/Users/rlmill/sage-3.0.6/sage_object.pyx in sage.structure.sage_object.SageObject._interface_ (sage/structure/sage_object.c:2082)()
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/matrix1.pyx in sage.matrix.matrix1.Matrix._gap_init_ (sage/matrix/matrix1.c:1287)()
+/Users/rlmill/sage-3.0.6/matrix1.pyx in sage.matrix.matrix1.Matrix._gap_init_ (sage/matrix/matrix1.c:1447)()
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/integer_mod.pyx in sage.rings.integer_mod.IntegerMod_abstract._gap_init_ (sage/rings/integer_mod.c:3124)()
+/Users/rlmill/sage-3.0.6/integer_mod.pyx in sage.rings.integer_mod.IntegerMod_abstract._gap_init_ (sage/rings/integer_mod.c:3315)()
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/gap.py in eval(self, x, newlines, strip)
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in eval(self, x, newlines, strip)
     307         if len(x) == 0 or x[len(x) - 1] != ';':
     308             x += ';'
 --> 309         s = Expect.eval(self, x)
     310         if newlines:
     311             return s
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/expect.py in eval(self, code, strip, synchronize, **kwds)
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/expect.py in eval(self, code, strip, synchronize, **kwds)
     915         try:
     916             with gc_disabled():
 --> 917                 return '\n'.join([self._eval_line(L, **kwds) for L in code.split('\n') if L != ''])
     918         except KeyboardInterrupt:
     919             # DO NOT CATCH KeyboardInterrupt, as it is being caught
 
-/home/wdj/sagefiles/sage-3.0.2.rc3/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _eval_line(self, line, allow_use_file, wait_for_prompt)
+/Users/rlmill/sage-3.0.6/local/lib/python2.5/site-packages/sage/interfaces/gap.py in _eval_line(self, line, allow_use_file, wait_for_prompt)
     508                         return ''
     509                 else:
 --> 510                     raise RuntimeError, message
-    511
+    511 
     512         except KeyboardInterrupt:
 
-RuntimeError: Unexpected EOF from Gap executing Int(Z(5));
+RuntimeError: Gap produced error output
+user interrupt while printing
+
+   executing Int(Z(5));
 ```