Added Frontiers Article #211
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| ^appveyor\.yml$ | ||
| ^.*\.Rproj$ | ||
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| ^\.travis\.yml$ | ||
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@@ -31,7 +31,8 @@ Authors@R: c( | |
| person("Dalton", "Hance", role = c("aut"), email = "[email protected]"), | ||
| person("Daniel", "Nüst", role = c("aut", "cph"), email = "[email protected]", comment = c(ORCID = "0000-0002-0024-5046")), | ||
| person("Petter", "Uvesten", role = c("aut", "cph"), email = "[email protected]"), | ||
| person("Elio", "Campitelli", role = c("aut", "cph"), email = "[email protected]", comment = c(ORCID = "0000-0002-7742-9230")), | ||
| person("John", "Muschelli", role = c("aut", "cph"), email = "[email protected]", comment = c(ORCID = "0000-0001-6469-1750")) | ||
| ) | ||
| Description: A suite of custom R Markdown formats and templates for | ||
| authoring journal articles and conference submissions. | ||
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| #' Frontiers open access journal format. | ||
| #' | ||
| #' Format for creating Frontiers journal articles. Adapted from | ||
| #' \href{http://home.frontiersin.org/about/author-guidelines}{http://home.frontiersin.org/about/author-guidelines}. | ||
| #' | ||
| #' @inheritParams rmarkdown::pdf_document | ||
| #' @param ... Additional arguments to \code{rmarkdown::pdf_document} | ||
| #' | ||
| #' @return R Markdown output format to pass to | ||
| #' \code{\link[rmarkdown:render]{render}} | ||
| #' | ||
| #' @export | ||
| frontiers_article <- function(..., | ||
| keep_tex = TRUE) { | ||
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| inherit_pdf_document(..., | ||
| template = find_resource("frontiers_article", "template.tex"), | ||
| keep_tex = keep_tex) | ||
| } |
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| %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | ||
| % This is just an example/guide for you to refer to when submitting manuscripts to Frontiers, it is not mandatory to use Frontiers .cls files nor frontiers.tex % | ||
| % This will only generate the Manuscript, the final article will be typeset by Frontiers after acceptance. | ||
| % % | ||
| % % | ||
| % When submitting your files, remember to upload this *tex file, the pdf generated with it, the *bib file (if bibliography is not within the *tex) and all the figures. | ||
| %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | ||
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| %%% Version 3.4 Generated 2018/06/15 %%% | ||
| %%% You will need to have the following packages installed: datetime, fmtcount, etoolbox, fcprefix, which are normally inlcuded in WinEdt. %%% | ||
| %%% In http://www.ctan.org/ you can find the packages and how to install them, if necessary. %%% | ||
| %%% NB logo1.jpg is required in the path in order to correctly compile front page header %%% | ||
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| \documentclass[utf8]{frontiersSCNS} % for Science, Engineering and Humanities and Social Sciences articles | ||
|
There was a problem hiding this comment. To make it possible for users to customize the document class, you can use https://github.com/jgm/pandoc-templates/blob/master/default.latex#L35 There was a problem hiding this comment. I've added this to the options, so you can do: |
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| %\documentclass[utf8]{frontiersHLTH} % for Health articles | ||
| %\documentclass[utf8]{frontiersFPHY} % for Physics and Applied Mathematics and Statistics articles | ||
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| %\setcitestyle{square} % for Physics and Applied Mathematics and Statistics articles | ||
| \usepackage{url,hyperref,lineno,microtype,subcaption} | ||
| \usepackage[onehalfspacing]{setspace} | ||
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| \linenumbers | ||
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| % BELOW TAKEN FROM rticles plos template | ||
| % | ||
| % amsmath package, useful for mathematical formulas | ||
| \usepackage{amsmath} | ||
| % amssymb package, useful for mathematical symbols | ||
| \usepackage{amssymb} | ||
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| % hyperref package, useful for hyperlinks | ||
| \usepackage{hyperref} | ||
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| % graphicx package, useful for including eps and pdf graphics | ||
| % include graphics with the command \includegraphics | ||
| \usepackage{graphicx} | ||
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| % Sweave(-like) | ||
| \usepackage{fancyvrb} | ||
| \DefineVerbatimEnvironment{Sinput}{Verbatim}{fontshape=sl} | ||
| \DefineVerbatimEnvironment{Soutput}{Verbatim}{} | ||
| \DefineVerbatimEnvironment{Scode}{Verbatim}{fontshape=sl} | ||
| \newenvironment{Schunk}{}{} | ||
| \DefineVerbatimEnvironment{Code}{Verbatim}{} | ||
| \DefineVerbatimEnvironment{CodeInput}{Verbatim}{fontshape=sl} | ||
| \DefineVerbatimEnvironment{CodeOutput}{Verbatim}{} | ||
| \newenvironment{CodeChunk}{}{} | ||
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| % cite package, to clean up citations in the main text. Do not remove. | ||
| \usepackage{cite} | ||
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| \usepackage{color} | ||
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| \providecommand{\tightlist}{% | ||
| \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}} | ||
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| % Below is from frontiers | ||
| % | ||
| \bibliographystyle{frontiersinSCNS} | ||
| % Use doublespacing - comment out for single spacing | ||
| %\usepackage{setspace} | ||
| %\doublespacing | ||
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| % Leave a blank line between paragraphs instead of using \\ | ||
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| \def\keyFont{\fontsize{8}{11}\helveticabold } | ||
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| %% ** EDIT HERE ** | ||
| %% PLEASE INCLUDE ALL MACROS BELOW | ||
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| %% END MACROS SECTION | ||
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| $for(header-includes)$ | ||
| $header-includes$ | ||
| $endfor$ | ||
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| $if(highlighting-macros)$ | ||
| $highlighting-macros$ | ||
| $endif$ | ||
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| \def\Authors{ | ||
| $for(author)$ | ||
| $author.name$\,\textsuperscript{$author.affiliation$$if(author.email)$*$endif$}$sep$, | ||
| $endfor$ | ||
| } | ||
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| \def\Address{ | ||
| $for(affiliation)$ | ||
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| \textsuperscript{$affiliation.id$} $if(affiliation.department)$$affiliation.department$, $endif$$if(affiliation.institution)$$affiliation.institution$, $endif$ $if(affiliation.city)$$affiliation.city$, $endif$ $if(affiliation.state)$$affiliation.state$, $endif$ $if(affiliation.country)$$affiliation.country$$endif$ | ||
| $endfor$} | ||
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| $for(author)$ | ||
| $if(author.email)$\def\corrAuthor{$author.name$}\def\corrAddress{$if(author.institution)$$author.institution$\\$endif$$if(author.street)$$author.street$\\$endif$$author.city$, $if(author.state)$$author.state$, $endif$$author.zip$ $if(author.country)$$author.country$$endif$}\def\corrEmail{$author.email$}$endif$ | ||
| $if(author.etal)$\def\firstAuthorLast{$author.etal$ {et~al.}}$endif$ | ||
| $endfor$ | ||
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| \begin{document} | ||
| \onecolumn | ||
| \firstpage{1} | ||
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| \title[$runtitle$]{$title$} | ||
| \author[\firstAuthorLast]{\Authors} | ||
| \address{} %This field will be automatically populated | ||
| \correspondance{} %This field will be automatically populated | ||
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| \extraAuth{}% If there are more than 1 corresponding author, comment this line and uncomment the next one. | ||
| %\extraAuth{corresponding Author2 \\ Laboratory X2, Institute X2, Department X2, Organization X2, Street X2, City X2 , State XX2 (only USA, Canada and Australia), Zip Code2, X2 Country X2, [email protected]} | ||
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| \maketitle | ||
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| $body$ | ||
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| \end{document} | ||
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| <?xml version="1.0" encoding="utf-8"?> | ||
| <style xmlns="http://purl.org/net/xbiblio/csl" class="in-text" version="1.0" demote-non-dropping-particle="sort-only" default-locale="en-US"> | ||
| <info> | ||
| <title>Frontiers journals</title> | ||
| <id>http://www.zotero.org/styles/frontiers</id> | ||
| <link href="http://www.zotero.org/styles/frontiers" rel="self"/> | ||
| <link href="http://www.frontiersin.org/about/AuthorGuidelines" rel="documentation"/> | ||
| <author> | ||
| <name>Sebastian Karcher</name> | ||
| </author> | ||
| <contributor> | ||
| <name>Julian Onions</name> | ||
| <email>[email protected]</email> | ||
| </contributor> | ||
| <category citation-format="author-date"/> | ||
| <category field="generic-base"/> | ||
| <summary>Style for the Open Access Frontiers in ... Journals</summary> | ||
| <updated>2012-09-27T22:06:38+00:00</updated> | ||
| <rights license="http://creativecommons.org/licenses/by-sa/3.0/">This work is licensed under a Creative Commons Attribution-ShareAlike 3.0 License</rights> | ||
| </info> | ||
| <macro name="editor"> | ||
| <names variable="editor" delimiter=", "> | ||
| <label form="short" prefix=", "/> | ||
| <name and="text" initialize-with=". " delimiter=", " prefix=" "/> | ||
| </names> | ||
| </macro> | ||
| <macro name="author"> | ||
| <names variable="author"> | ||
| <name name-as-sort-order="all" and="text" sort-separator=", " initialize-with=". " delimiter=", " delimiter-precedes-last="always"/> | ||
| <label form="short" prefix=" "/> | ||
| <substitute> | ||
| <names variable="editor"/> | ||
| <text variable="title"/> | ||
| </substitute> | ||
| </names> | ||
| </macro> | ||
| <macro name="author-short"> | ||
| <names variable="author"> | ||
| <name form="short" and="text" delimiter=", " initialize-with=". "/> | ||
| <substitute> | ||
| <names variable="editor"/> | ||
| <names variable="translator"/> | ||
| <text variable="title"/> | ||
| </substitute> | ||
| </names> | ||
| </macro> | ||
| <macro name="access"> | ||
| <choose> | ||
| <if variable="DOI"> | ||
| <text variable="DOI" prefix="doi:"/> | ||
| </if> | ||
| <else-if variable="URL"> | ||
| <text value="Available at:" suffix=" "/> | ||
| <text variable="URL"/> | ||
| <group prefix=" [" suffix="]"> | ||
| <text term="accessed" text-case="capitalize-first" suffix=" "/> | ||
| <date variable="accessed"> | ||
| <date-part name="month" suffix=" "/> | ||
| <date-part name="day" suffix=", "/> | ||
| <date-part name="year"/> | ||
| </date> | ||
| </group> | ||
| </else-if> | ||
| </choose> | ||
| </macro> | ||
| <macro name="title"> | ||
| <choose> | ||
| <if type="book"> | ||
| <text variable="title" font-style="italic" suffix="."/> | ||
| </if> | ||
| <else-if type="chapter"> | ||
| <text variable="title" quotes="true" suffix=","/> | ||
| </else-if> | ||
| <else> | ||
| <text variable="title" suffix="."/> | ||
| </else> | ||
| </choose> | ||
| </macro> | ||
| <macro name="publisher"> | ||
| <group delimiter=": "> | ||
| <text variable="publisher-place"/> | ||
| <text variable="publisher"/> | ||
| </group> | ||
| </macro> | ||
| <macro name="year-date"> | ||
| <date variable="issued"> | ||
| <date-part name="year"/> | ||
| </date> | ||
| </macro> | ||
| <macro name="edition"> | ||
| <choose> | ||
| <if is-numeric="edition"> | ||
| <group delimiter=" "> | ||
| <number variable="edition" form="ordinal"/> | ||
| <text term="edition" form="short"/> | ||
| </group> | ||
| </if> | ||
| <else> | ||
| <text variable="edition" suffix="."/> | ||
| </else> | ||
| </choose> | ||
| </macro> | ||
| <citation et-al-min="3" et-al-use-first="1" disambiguate-add-year-suffix="true" collapse="year"> | ||
| <layout prefix="(" suffix=")" delimiter="; "> | ||
| <group delimiter=", "> | ||
| <text macro="author-short"/> | ||
| <text macro="year-date"/> | ||
| <text variable="locator"/> | ||
| </group> | ||
| </layout> | ||
| </citation> | ||
| <bibliography hanging-indent="true" et-al-min="11" et-al-use-first="10"> | ||
| <sort> | ||
| <key macro="author"/> | ||
| <key variable="title"/> | ||
| </sort> | ||
| <layout suffix="."> | ||
| <text macro="author"/> | ||
| <date variable="issued" prefix=" (" suffix=")."> | ||
| <date-part name="year"/> | ||
| </date> | ||
| <choose> | ||
| <if type="bill book graphic legal_case legislation motion_picture report song" match="any"> | ||
| <group delimiter=" " prefix=" "> | ||
| <text macro="title"/> | ||
| <text macro="edition"/> | ||
| <text macro="editor"/> | ||
| <text macro="publisher"/> | ||
| </group> | ||
| </if> | ||
| <else-if type="chapter paper-conference" match="any"> | ||
| <group delimiter=" " prefix=" "> | ||
| <text macro="title"/> | ||
| <text term="in"/> | ||
| <text variable="container-title" font-style="italic"/> | ||
| <text variable="collection-title" suffix="."/> | ||
| </group> | ||
| <text macro="editor"/> | ||
| <group suffix="."> | ||
| <text macro="publisher" prefix=" (" suffix=")"/> | ||
| <group prefix=", "> | ||
| <text variable="page"/> | ||
| </group> | ||
| </group> | ||
| </else-if> | ||
| <else> | ||
| <text macro="title" prefix=" " suffix="."/> | ||
| <group delimiter=", " prefix=" " suffix="."> | ||
| <group delimiter=" "> | ||
| <text variable="container-title" form="short" font-style="italic"/> | ||
| <text variable="volume"/> | ||
| </group> | ||
| <text variable="page"/> | ||
| </group> | ||
| </else> | ||
| </choose> | ||
| <text prefix=" " macro="access"/> | ||
| </layout> | ||
| </bibliography> | ||
| </style> |
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