v4.10.0 - Add additional properties to annotations

[julie-sullivan]

There are two changes in this PR.

ClinVar - add associated scvIds, vcvIds, rcvIds to additional properties

// for VCV records
additionalProperties: [
    ...,
   {
     "name": "scvIds",
     "value": "SCV00403947,SCV00403949,SCV0040393423434"
   }
]

// for SCV records
additionalProperties: [
   ...,
   {
     "name": "vcvIds",
     "value": "39478"
   }
]

MNVs - other variants considered as part of phased MNV annotation

// variant additionalAttributes
"additionalAttributes": {
    "phasedTranscripts": {
        "attribute": {             
            "ENST0034245234": "1:343423:C:G,1:343423:CA:G",
            "ENST0034245236": "1:343423:C:G,1:343423:CA:G",   
            "ENST0034245237": "1:343423:C:G",
        }
    }
}

[javild]

@julie-sullivan this line should not be needed

[javild]

is this method being used anywhere?

[julie-sullivan]

nope. copy paste error! removed.

[javild]

Avoid using "KPVP" in names etc. it's a very internal GeL acronym :)

[julie-sullivan]

merged into new v4.10.0 branch.