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@mgxd mgxd commented Jun 21, 2023

This PR incorporates changes from nipreps/fmriprep#3011, taking some deviations to handle the case of MCRIBS surface processing.

mgxd added 14 commits June 15, 2023 17:14
There is a bug deep within nipype workflow connection / join expansions that either:
- mistakenly uses node.name rather than node._hierarchy to fetch the relevant node or
- reuses a previous JoinNode's `_next_slot_index`

In either case, the end result is some funky indexed connection (in this case it was looking for the fields `bold_fsLRJ3` and `bold_fsLRJ4`.

I spent some time in the rabbit hole and came out empty-handed, but the easiest solution seems to be just renaming them to something unique. Pain.
@mgxd mgxd marked this pull request as ready for review June 23, 2023 20:04
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mgxd commented Jun 23, 2023

Merging this for dev testing

@mgxd mgxd merged commit 0a59cd2 into nipreps:fix/goodvoxels Jun 23, 2023
@mgxd mgxd deleted the fix/goodvoxels branch June 23, 2023 20:43
@mgxd mgxd mentioned this pull request Jun 23, 2023
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