Fix SoftDeletes for null values in the DB (not deleted entries). #144
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- Tweaked description of `clean` flag to make its usage clearer. - Made sure to do a `not` on the flag since `$saveMode = false` is what will clean out the database of unneeded assets. So, not providing the `--clean` flag will mean that we only update the tables that have changed and leave everything else as is. - Make sure the clean flag is used when actually updating the schema and not just used to get the SQL.
fix usage of saveMode via the clean flag
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Function isDeleted for SoftDeletes returns true even if value of isDeleted is set to null. This fix changes the return value to false in this case.