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1. MalikLab_bioinformaticsResources MalikLab_bioinformaticsResources Public

   HTML 2

2. pamlWrapper pamlWrapper Public

   starting with an in-frame alignment, run PAML and parse output

   Perl 1

3. MKtests_JY MKtests_JY Public

   R functions to perform McDonald-Kreitman tests

   R

4. Arp53D_popCage Arp53D_popCage Public

   population cage modelling for Schroeder et al, 2021

   R

5. genomicSeq_callSNPs genomicSeq_callSNPs Public

   simple folder to teach Courtney and Risa how to call SNPs in genomic sequence (Drosophila)

6. pamlApps pamlApps Public

   utilities to parse and plot PAML output

   R