The h5_analyze_demo.R script uses the RegenOrNoRegen R package to classify neurons as regenerating or non-regenerating based on gene expression levels from scRNA-seq data.
This is just a demo mostly for
- extracting from an h5 format that is incompatible with Seurat's
Read10X_h5()function - using the RegenOrNoRegen package
The script order is: h5_extract_demo.R -> h5_filter_options_demo.R -> h5_analyze_demo.R
See the RegenOrNoRegen repository for package dependency requirements.