Algorithmic Bioinformatics Lab @ University of Helsinki
- 44 followers
- Helsinki, Finland
- http://www.helsinki.fi/algorithmic-bioinformatics
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GraphChainer
GraphChainer PublicAn accurate aligner of long reads to a variation graph, based on co-linear chaining
Repositories
Showing 10 of 46 repositories
- BubbleFinder Public
algbio/BubbleFinder’s past year of commit activity - BubbleFinder-experiments Public
algbio/BubbleFinder-experiments’s past year of commit activity - optimized-fd Public
algbio/optimized-fd’s past year of commit activity - MFD-ILP Public
Fast and exact ILP-based solvers for the Minimum Flow Decomposition problem, and variants of it.
algbio/MFD-ILP’s past year of commit activity - flowpaths Public
A Python package to quickly decompose weighted graphs (acyclic or not) into weighted paths or walks, under various models.
algbio/flowpaths’s past year of commit activity - bioconda-recipes Public Forked from bioconda/bioconda-recipes
Conda recipes for the bioconda channel.
algbio/bioconda-recipes’s past year of commit activity - GraphChainer-scripts Public
algbio/GraphChainer-scripts’s past year of commit activity
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