Refactor of source retrieval provenance model

[mbrush]

Adding RetrievalSource object (and a reference to it form Edge) to support richer representations of retrieval provenance per #369.

[edeutsch]

looks good

[edeutsch]

should these have biolink: prefixes?

[edeutsch]

https://biolink.github.io/biolink-model/docs/primary_knowledge_source.html

[edeutsch]

however, the build is failing because you have exceeded the dreaded 79 character limit.

[edeutsch]

super-fussy yamllint is still unhappy with this PR:

  875:26    error    trailing spaces  (trailing-spaces)

  877:63    error    trailing spaces  (trailing-spaces)

  878:71    error    trailing spaces  (trailing-spaces)

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  1209:23   error    trailing spaces  (trailing-spaces)

  1212:71   error    trailing spaces  (trailing-spaces)

  1214:70   error    trailing spaces  (trailing-spaces)

  1222:17   error    trailing spaces  (trailing-spaces)

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  1225:68   error    trailing spaces  (trailing-spaces)

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  1232:69   error    trailing spaces  (trailing-spaces)

  1238:1    error    syntax error: found unexpected end of stream (syntax)

[edeutsch]

maybe "upstream_resources" would be better?

• upstream seems better than "previous"?
• plural since an array?

[edeutsch]

Automatic checks are still failing. I think the problem is that on line 1124 there is an unclosed quote

[edeutsch]

The automatic build is still failing. The goal would be to ensure that the automatic validation passes.
yamllint is now happy but there are multiple OpenAPI schema violations. I think the easiest way to debug your yaml is to paste the entire yaml document in https://editor.swagger.io/ (after clearing the current content)
That interface is pretty good about showing you the schema problems.

[sierra-moxon]

I fixed the tests for this change in PR #393, this PR could be closed in favor of that one (it was easier to collaborate on a new branch in this repo, then try to fix this off of a fork of your fork off of Richard's fork @mbrush :) ).

[mbrush]

Replaced with PR #393 (in which @sierra-moxon fixed syntax errors that were causing test failures, and made resourceRole an object to reference so that it can leverage biolink enums)