Cannot build Cairo.jl on macOS Mojave

[ronisbr]

Hi guys!

I am trying to build Cairo.jl on macOS Mojave (clean Julia installation) and I am getting the following error:

┌ Error: Error building `Cairo`:
│ ==> Installing graphite2 from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/graphite2-1.3.13.mojave.bottle.tar.gz
│ Already downloaded: /Users/ronan.arraes/Library/Caches/Homebrew.jl/downloads/36f9054572b26853c4726b48a48041476190c6e2069d088be488bd9489445ade--graphite2-1.3.13.mojave.bottle.tar.gz
│ ==> Pouring graphite2-1.3.13.mojave.bottle.tar.gz
│ 🍺  /Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/graphite2/1.3.13: 18 files, 232.2KB
│ Warning: Already linked: /Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/graphite2/1.3.13
│ ==> Installing gettext from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/gettext-0.19.8.1.mojave.bottle.tar.gz
│ Already downloaded: /Users/ronan.arraes/Library/Caches/Homebrew.jl/downloads/20fb183d8882abab5874937646456a6d73fcd3510ec65a0b2a54fdfeb0174519--gettext-0.19.8.1.mojave.bottle.tar.gz
│ ==> Pouring gettext-0.19.8.1.mojave.bottle.tar.gz
│ ==> Caveats
│ gettext is keg-only, which means it was not symlinked into /Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr,
│ because macOS provides the BSD gettext library & some software gets confused if both are in the library path.
│
│ If you need to have gettext first in your PATH run:
│   echo 'export PATH="/Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr/opt/gettext/bin:$PATH"' >> ~/.zshrc
│
│ For compilers to find gettext you may need to set:
│   export LDFLAGS="-L/Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr/opt/gettext/lib"
│   export CPPFLAGS="-I/Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr/opt/gettext/include"
│
│ ==> Summary
│ 🍺  /Users/ronan.arraes/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/gettext/0.19.8.1: 1,935 files, 16.9MB
│
│ signal (11): Segmentation fault: 11
│ in expression starting at /Users/ronan.arraes/.julia/packages/Cairo/CXPG1/deps/build.jl:165
│ _platform_strcmp at /usr/lib/system/libsystem_platform.dylib (unknown line)
│ Allocations: 20714313 (Pool: 20711314; Big: 2999); GC: 46
└ @ Pkg.Operations /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.1/Pkg/src/Operations.jl:1075

Trying to build manually Cairo leads to:

julia> Pkg.build("Cairo")
  Building LibCURL ─→ `~/.julia/packages/LibCURL/OoXMv/deps/build.log`
  Building WinRPM ──→ `~/.julia/packages/WinRPM/Y9QdZ/deps/build.log`
  Building Homebrew → `~/.julia/packages/Homebrew/s09IX/deps/build.log`
  Building Cairo ───→ `~/.julia/packages/Cairo/CXPG1/deps/build.log`
┌ Error: Error building `Cairo`:
│
│ signal (11): Segmentation fault: 11
│ in expression starting at /Users/ronan.arraes/.julia/packages/Cairo/CXPG1/deps/build.jl:165
│ _platform_strcmp at /usr/lib/system/libsystem_platform.dylib (unknown line)
│ Allocations: 19803997 (Pool: 19801167; Big: 2830); GC: 44
└ @ Pkg.Operations /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.1/Pkg/src/Operations.jl:1075

[mcmcgrath13]

I am also getting this error, both locally and on Travis

[aramirezreyes]

Me as well.
Using Julia Version 1.0.2 (2018-11-08)
Mac Os Mojave 10.14.3

[cormullion]

I can now see this error on Travis, which looks to have been introduced since I last ran it (which was 5 days ago, Tuesday):

https://travis-ci.org/JuliaGraphics/Luxor.jl/jobs/503554126

(Although Travis builds on the previous macOS release rather than the latest Mojave, I think.)

It might be a fontconfig/pango problem?

[lobingera]

@cormullion It's obviously a homebrew/brew problem in the first place. Do you have a build log with homebrew version output available?

[cormullion]

Only the Travis logs I limked to... I've not had the problem locally (i've pinned a few things to avoid these productivity-ruining issues.. :).

[sdanthine]

Get similar tasting error:
┌ Error: Error building Cairo:
│
│ signal (11): Segmentation fault: 11
│ in expression starting at /Users/sdanthine/.julia/packages/Cairo/CXPG1/deps/build.jl:165
│ _platform_strcmp at /usr/lib/system/libsystem_platform.dylib (unknown line)
│ Allocations: 19234553 (Pool: 19231774; Big: 2779); GC: 42

Funny thing is, managed to build it on one computer, not on the other. Both are Mac Mojave, both times initially Queryverse needed Cairo.

Below is the message I get from initial install of Queryverse. Any ideas where to go? Thanks

┌ Error: Error building Cairo, showing the last 100 of log:
│ See: https://docs.brew.sh/Homebrew-and-Python
│ ==> Summary
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/python/3.7.2_2: 3,861 files, 59.7MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/python/3.7.2_2
│ ==> Installing libffi from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/libffi-3.2.1.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/89b4ef328be250153e7a2b39982ac446e0b3bbfe7f3e2708912ba1976862c302--libffi-3.2.1.mojave.bottle.tar.gz
│ ==> Pouring libffi-3.2.1.mojave.bottle.tar.gz
│ ==> Caveats
│ libffi is keg-only, which means it was not symlinked into /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr,
│ because some formulae require a newer version of libffi.
│
│ For compilers to find libffi you may need to set:
│ export LDFLAGS="-L/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/libffi/lib"
│
│ For pkg-config to find libffi you may need to set:
│ export PKG_CONFIG_PATH="/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/libffi/lib/pkgconfig"
│
│ ==> Summary
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/libffi/3.2.1: 16 files, 297.0KB
│ ==> Installing glib from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/glib-2.60.0_1.mojave.bottle.tar.gz
│ ==> Pouring glib-2.60.0_1.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/glib/2.60.0_1: 432 files, 15.3MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/glib/2.60.0_1
│ ==> Installing libpng from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/libpng-1.6.36.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/b401f5b07a537975da7de448c4bbdaf0c2112d5dc7d8e0955e0d4fb938909010--libpng-1.6.36.mojave.bottle.tar.gz
│ ==> Pouring libpng-1.6.36.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/libpng/1.6.36: 27 files, 1.2MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/libpng/1.6.36
│ ==> Installing freetype from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/freetype-2.9.1.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/89f20f0e2fae652cad0bf2c354912f65951b055050a0cf525f6a67939cb6e682--freetype-2.9.1.mojave.bottle.tar.gz
│ ==> Pouring freetype-2.9.1.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/freetype/2.9.1: 60 files, 2.6MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/freetype/2.9.1
│ ==> Installing fontconfig from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/fontconfig-2.13.1.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/b7ad94d49bcdca22738f50b570efc07c7a20f98a469b3c4b32198b7318b8af5a--fontconfig-2.13.1.mojave.bottle.tar.gz
│ ==> Pouring fontconfig-2.13.1.mojave.bottle.tar.gz
│ ==> Regenerating font cache, this may take a while
│ ==> /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/fontconfig/2.13.1/bin/fc-cache -frv
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/fontconfig/2.13.1: 531 files, 3.3MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/fontconfig/2.13.1
│ ==> Installing pixman from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/pixman-0.38.0.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/0c26d4c3daf0b26cd91366caf1df3eca0bad5611e9742a0f8b409d6b80fc6a53--pixman-0.38.0.mojave.bottle.tar.gz
│ ==> Pouring pixman-0.38.0.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/pixman/0.38.0: 13 files, 1.3MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/pixman/0.38.0
│ ==> Installing cairo from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/cairo-1.16.0.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/fafc9fd181a939883ef055697994edea57d091a35299109bf774fc91092fbae7--cairo-1.16.0.mojave.bottle.tar.gz
│ ==> Pouring cairo-1.16.0.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/cairo/1.16.0: 117 files, 5.5MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/cairo/1.16.0
│ ==> Installing icu4c from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/icu4c-63.1.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/88108185da55bf1af475d5e191e97f633514bd24c1c70bb89029af6cf5cc5185--icu4c-63.1.mojave.bottle.tar.gz
│ ==> Pouring icu4c-63.1.mojave.bottle.tar.gz
│ ==> Caveats
│ icu4c is keg-only, which means it was not symlinked into /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr,
│ because macOS provides libicucore.dylib (but nothing else).
│
│ If you need to have icu4c first in your PATH run:
│ echo 'export PATH="/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/icu4c/bin:$PATH"' >> ~/.bash_profile
│ echo 'export PATH="/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/icu4c/sbin:$PATH"' >> ~/.bash_profile
│
│ For compilers to find icu4c you may need to set:
│ export LDFLAGS="-L/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/icu4c/lib"
│ export CPPFLAGS="-I/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/icu4c/include"
│
│ For pkg-config to find icu4c you may need to set:
│ export PKG_CONFIG_PATH="/Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/opt/icu4c/lib/pkgconfig"
│
│ ==> Summary
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/icu4c/63.1: 254 files, 68.4MB
│ ==> Installing fribidi from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/fribidi-1.0.5.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/b966c6f589c81500014b64f8e15ff29e9b70f3e7ee8e0b0b5851f700c2ad0fa4--fribidi-1.0.5.mojave.bottle.tar.gz
│ ==> Pouring fribidi-1.0.5.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/fribidi/1.0.5: 66 files, 581.4KB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/fribidi/1.0.5
│ ==> Installing harfbuzz from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/harfbuzz-2.3.1.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/784a181552c10546bdab9595d963a36fa65d6e17cc04609285349cb81be623b9--harfbuzz-2.3.1.mojave.bottle.tar.gz
│ ==> Pouring harfbuzz-2.3.1.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/harfbuzz/2.3.1: 180 files, 9.5MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/harfbuzz/2.3.1
│ ==> Installing pango from staticfloat/juliatranslated
│ ==> Downloading https://homebrew.bintray.com/bottles/pango-1.42.4_1.mojave.bottle.tar.gz
│ Already downloaded: /Users/sdanthine/Library/Caches/Homebrew.jl/downloads/f7d576fd30d48fab15ea38e97c79854a517864b3a64199be1550eb79e1143cf3--pango-1.42.4_1.mojave.bottle.tar.gz
│ ==> Pouring pango-1.42.4_1.mojave.bottle.tar.gz
│ 🍺 /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/pango/1.42.4_1: 106 files, 4.4MB
│ Warning: Already linked: /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/Cellar/pango/1.42.4_1
│
│ signal (11): Segmentation fault: 11
│ in expression starting at /Users/sdanthine/.julia/packages/Cairo/CXPG1/deps/build.jl:165
│ _platform_strcmp at /usr/lib/system/libsystem_platform.dylib (unknown line)
│ Allocations: 20858472 (Pool: 20855284; Big: 3188); GC: 46
│
│ Full log at /Users/sdanthine/.julia/packages/Cairo/CXPG1/deps/build.log

[lobingera]

I can see the same thing on a recent build in travis. My first (and only) guess is, something changed in brew,

[cormullion]

It's confusing me that Travis is running:

ProductName:	Mac OS X
ProductVersion:	10.13.3

(which is High Sierra, not Mojave).

[jonathanBieler]

Can this be reproduced using brew alone :

brew install cairo

/Users/username/.julia/packages/Homebrew/s09IX/deps/usr/bin/brew install cairo

?

[sdanthine]

I did /Users/sdanthine/.julia/packages/Homebrew/s09IX/deps/usr/bin/brew reinstall cairo

then tried using Queryverse with error as below once more. Really puzzing to me.

[ Info: Precompiling Queryverse [612083be-0b0f-5412-89c1-4e7c75506a58]
ERROR: LoadError: Cairo not properly installed. Please run
Pkg.build("Cairo")
Stacktrace:
 [1] error(::String, ::String) at ./error.jl:42
 [2] top-level scope at none:0
 [3] include at ./boot.jl:326 [inlined]
 [4] include_relative(::Module, ::String) at ./loading.jl:1038
 [5] include(::Module, ::String) at ./sysimg.jl:29
 [6] top-level scope at none:2
 [7] eval at ./boot.jl:328 [inlined]
 [8] eval(::Expr) at ./client.jl:404
 [9] top-level scope at ./none:3
in expression starting at /Users/sdanthine/.julia/packages/Cairo/CXPG1/src/Cairo.jl:9
ERROR: LoadError: Failed to precompile Cairo [159f3aea-2a34-519c-b102-8c37f9878175] to /Users/sdanthine/.julia/compiled/v1.1/Cairo/l6vnT.ji.
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1197
 [3] _require(::Base.PkgId) at ./loading.jl:960
 [4] require(::Base.PkgId) at ./loading.jl:858
 [5] require(::Module, ::Symbol) at ./loading.jl:853
 [6] include at ./boot.jl:326 [inlined]
 [7] include_relative(::Module, ::String) at ./loading.jl:1038
 [8] include(::Module, ::String) at ./sysimg.jl:29
 [9] top-level scope at none:2
 [10] eval at ./boot.jl:328 [inlined]
 [11] eval(::Expr) at ./client.jl:404
 [12] top-level scope at ./none:3
in expression starting at /Users/sdanthine/.julia/packages/Rsvg/uwc9D/src/Rsvg.jl:8
ERROR: LoadError: Failed to precompile Rsvg [c4c386cf-5103-5370-be45-f3a111cca3b8] to /Users/sdanthine/.julia/compiled/v1.1/Rsvg/aWLhH.ji.
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1197
 [3] _require(::Base.PkgId) at ./loading.jl:960
 [4] require(::Base.PkgId) at ./loading.jl:858
 [5] require(::Module, ::Symbol) at ./loading.jl:853
 [6] include at ./boot.jl:326 [inlined]
 [7] include_relative(::Module, ::String) at ./loading.jl:1038
 [8] include(::Module, ::String) at ./sysimg.jl:29
 [9] top-level scope at none:2
 [10] eval at ./boot.jl:328 [inlined]
 [11] eval(::Expr) at ./client.jl:404
 [12] top-level scope at ./none:3
in expression starting at /Users/sdanthine/.julia/packages/VegaLite/5UYyY/src/VegaLite.jl:3
ERROR: LoadError: Failed to precompile VegaLite [112f6efa-9a02-5b7d-90c0-432ed331239a] to /Users/sdanthine/.julia/compiled/v1.1/VegaLite/lrJqi.ji.
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1197
 [3] _require(::Base.PkgId) at ./loading.jl:960
 [4] require(::Base.PkgId) at ./loading.jl:858
 [5] require(::Module, ::Symbol) at ./loading.jl:853
 [6] include at ./boot.jl:326 [inlined]
 [7] include_relative(::Module, ::String) at ./loading.jl:1038
 [8] include(::Module, ::String) at ./sysimg.jl:29
 [9] top-level scope at none:2
 [10] eval at ./boot.jl:328 [inlined]
 [11] eval(::Expr) at ./client.jl:404
 [12] top-level scope at ./none:3
in expression starting at /Users/sdanthine/.julia/packages/Queryverse/BmZo1/src/Queryverse.jl:16
ERROR: Failed to precompile Queryverse [612083be-0b0f-5412-89c1-4e7c75506a58] to /Users/sdanthine/.julia/compiled/v1.1/Queryverse/hLJnW.ji.
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1197
 [3] _require(::Base.PkgId) at ./loading.jl:960
 [4] require(::Base.PkgId) at ./loading.jl:858
 [5] require(::Module, ::Symbol) at ./loading.jl:853

[sdanthine]

And when I then try building Cairo from Julia: Pkg.build("Cairo"):

.............
  Building LibCURL ─→ `~/.julia/packages/LibCURL/OoXMv/deps/build.log`
  Building WinRPM ──→ `~/.julia/packages/WinRPM/Y9QdZ/deps/build.log`
  Building Homebrew → `~/.julia/packages/Homebrew/s09IX/deps/build.log`
  Building Cairo ───→ `~/.julia/packages/Cairo/CXPG1/deps/build.log`
┌ Error: Error building `Cairo`: 
│ 
│ signal (11): Segmentation fault: 11
│ in expression starting at /Users/sdanthine/.julia/packages/Cairo/CXPG1/deps/build.jl:165
│ _platform_strcmp at /usr/lib/system/libsystem_platform.dylib (unknown line)
│ Allocations: 19333078 (Pool: 19330283; Big: 2795); GC: 43
└ @ Pkg.Operations /Users/osx/buildbot/slave/package_osx64/build/usr/share/julia/stdlib/v1.1/Pkg/src/Operations.jl:1075
..............

so seems like it can't find libsystem_platform.dylib

[jonathanBieler]

So brew alone works, correct ? I'm just trying to understand if we should open an issue on homebrew-core or not.

[sdanthine]

Yes brew alone works.

…

On Thu, Mar 14, 2019 at 3:12 PM Jonathan Bieler ***@***.***> wrote: So brew alone works, correct ? I'm just trying to understand if we should open an issue on homebrew-core or not. — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#271 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AVxxWURmvO-rIdkspmaMI7TXeZA4y7l4ks5vWljkgaJpZM4bl1bX> .