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@dilawar dilawar commented Nov 10, 2019

  1. This PR remove a old graphutil.py.
  2. Adds some functions to dump topology of the reaction network to a graph. For example, the CaMKII pathway is dumped into a Graphviz file and plotted as the following:

image

The graphviz file is written manually. It does not add any dependency. One can do a quick visualization of the reaction network. This utility is NOT imported by default.

  1. Added documentation string to some other functions in utilities.

@dilawar dilawar force-pushed the utils branch 2 times, most recently from a904910 to 18fab80 Compare March 3, 2020 08:44
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dilawar commented Mar 5, 2020

Merged into #392

@dilawar dilawar closed this Mar 5, 2020
@dilawar dilawar deleted the utils branch March 5, 2020 09:27
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