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14 changes: 10 additions & 4 deletions activitysim/abm/tables/skims.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,8 @@
import multiprocessing

from collections import OrderedDict
from functools import reduce
from operator import mul

import numpy as np
import openmatrix as omx
Expand Down Expand Up @@ -90,7 +92,7 @@ def get_skim_info(omx_file_path, tags_to_load=None):

if MAX_BLOCK_BYTES:
max_block_items = MAX_BLOCK_BYTES // np.dtype(skim_dtype).itemsize
max_skims_per_block = max_block_items // np.prod(omx_shape)
max_skims_per_block = max_block_items // multiply_large_numbers(omx_shape)
else:
max_skims_per_block = num_skims

Expand Down Expand Up @@ -149,14 +151,14 @@ def block_name(block):
def buffers_for_skims(skim_info, shared=False):

skim_dtype = skim_info['dtype']
omx_shape = [np.float64(x) for x in skim_info['omx_shape']]
omx_shape = skim_info['omx_shape']
blocks = skim_info['blocks']

skim_buffers = {}
for block_name, block_size in iteritems(blocks):

# buffer_size must be int (or p2.7 long), not np.int64
buffer_size = int(np.prod(omx_shape) * block_size)
buffer_size = int(multiply_large_numbers(omx_shape) * block_size)

csz = buffer_size * np.dtype(skim_dtype).itemsize
logger.info("allocating shared buffer %s for %s (%s) matrices (%s)" %
Expand Down Expand Up @@ -191,7 +193,7 @@ def skim_data_from_buffers(skim_buffers, skim_info):
for block_name, block_size in iteritems(blocks):
skims_shape = omx_shape + (block_size,)
block_buffer = skim_buffers[block_name]
assert len(block_buffer) == int(np.prod(skims_shape))
assert len(block_buffer) == int(multiply_large_numbers(skims_shape))
block_data = np.frombuffer(block_buffer, dtype=skim_dtype).reshape(skims_shape)
skim_data.append(block_data)

Expand Down Expand Up @@ -261,6 +263,10 @@ def skim_dict(data_dir, settings):
return skim_dict


def multiply_large_numbers(list_of_numbers):
return reduce(mul, list_of_numbers)


@inject.injectable(cache=True)
def skim_stack(skim_dict):

Expand Down
67 changes: 67 additions & 0 deletions activitysim/abm/test/test_skims.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,67 @@
from collections import OrderedDict
from future.utils import iteritems

import numpy as np
import pytest

from activitysim.abm.tables import skims


@pytest.fixture(scope="session")
def matrix_dimension():
return 5922


@pytest.fixture(scope="session")
def num_of_matrices():
return 845


@pytest.fixture(scope="session")
def skim_info(num_of_matrices, matrix_dimension):
time_periods = ['EA', 'AM', 'MD', 'PM', 'NT']

omx_keys = OrderedDict()
omx_key1_block_offsets = OrderedDict()
omx_block_offsets = OrderedDict()
omx_blocks = OrderedDict()
omx_blocks['skim_arc_skims_0'] = num_of_matrices

for i in range(0, num_of_matrices + 1):
key1_name = 'm{}'.format(i // len(time_periods) + 1)
time_period = time_periods[i % len(time_periods)]

omx_keys[(key1_name, time_period)] = '{}__{}'.format(key1_name, time_period)
omx_block_offsets[(key1_name, time_period)] = (0, i)

if 0 == i % len(time_periods):
omx_key1_block_offsets[key1_name] = (0, i)

skim_info = {
'omx_name': 'arc_skims',
'omx_shape': (matrix_dimension, matrix_dimension),
'num_skims': num_of_matrices,
'dtype': np.float32,
'omx_keys': omx_keys,
'key1_block_offsets': omx_key1_block_offsets,
'block_offsets': omx_block_offsets,
'blocks': omx_blocks
}

return skim_info


def test_multiply_large_numbers(skim_info, num_of_matrices, matrix_dimension):
omx_shape = skim_info['omx_shape']
blocks = skim_info['blocks']

for block_name, block_size in iteritems(blocks):
# If overflow, this number will go negative
assert int(skims.multiply_large_numbers(omx_shape) * block_size) == \
num_of_matrices * matrix_dimension ** 2


def test_multiple_large_floats():
calculated_value = skims.multiply_large_numbers([6205.1, 5423.2, 932.4, 15.4])
actual_value = 483200518316.9472
assert abs(calculated_value - actual_value) < 0.0001