Bounded Variables appears to be broken on v4 branch #4719
Description
Description of your problem
Use of pm.Bound() does not seem to work on the v4 branch. This has been tested on PyPI version (3.10.0) which still works. Due to the evolving changes on the v4 branch and aesara version changes, I haven't pinpointed when this stopped working. I'm using Python 3.6 as comparison so I can run properly on PyPI version (On Windows).
I've also verified the same error on Ubuntu w/ python 3.7 & 3.8.
Please provide a minimal, self-contained, and reproducible example.
import numpy as np
import pymc3 as pm
xx = np.array([4.0, 4.0, 4.0, 5.0, 5.0, 5.0, 6.0, 3.0])
model_gamma = pm.Model()
with model_gamma:
BoundedHalfNormal = pm.Bound(pm.HalfNormal, lower=0.0)
mu = BoundedHalfNormal("μ", sigma=10)
sigma= BoundedHalfNormal("σ", sigma=10)
obs = pm.Gamma("obs", mu=mu, sigma=sigma, observed=xx)
idata_gamma = pm.sample(
draws=2_000, tune=2_000, cores=1, chains=1, return_inferencedata=True
)Please provide the full traceback.
WARNING (aesara.tensor.blas): Using NumPy C-API based implementation for BLAS functions.
Traceback (most recent call last):
File "bounded_test.py", line 12, in <module>
mu = BoundedHalfNormal("μ", sigma=10) tions.
File "c:\users\hectormz\projects\tools\pymc3\pymc3\distributions\bound.py", line 290, in __call__
return _ContinuousBounded(
File "c:\users\hectormz\projects\tools\pymc3\pymc3\distributions\distribution.py",90, in __call__ line 247, in __new__
rv_out = cls.dist(*args, rng=rng, testval=None, **kwargs) line 247, in __new__
TypeError: dist() takes 2 positional arguments but 5 positional arguments (and 1 keyword-only argument) were given Please provide any additional information below.
Working versions and main components
- PyMC3 Version:
pymc3==3.10.0 - Aesara Version:
Theano-PyMC==1.0.11 - Python Version:
3.6 - Operating system:
Windows 10 - How did you install PyMC3:
pip
Broken versions and main components
- PyMC3 Version: 0970af0
- Aesara Version:
aesara==2.0.10 - Python Version:
3.6 - Operating system:
Windows 10 - How did you install PyMC3: local
pipinstall from repo