You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Copy file name to clipboardExpand all lines: README.md
+6-6Lines changed: 6 additions & 6 deletions
Original file line number
Diff line number
Diff line change
@@ -28,19 +28,19 @@ on additional functions from nipype (including `list_outputs`), each interface c
28
28
- inputs_metadata: additional metadata for fields from input_spec
29
29
(it will be included in `metadata` in pydra spec),
30
30
e.g., used in `specs/fsl_preprocess_params.yml` for `FAST` to set default value for `number_classes`
31
-
(it's not part of nipype's spec, but it's set in `list_output`)
31
+
(it's not part of nipype's spec, but it's set in `list_output`, see [here](https://github.com/nipy/nipype/blob/f4343d6ddaee814aa16b197cc729a10d437990bf/nipype/interfaces/fsl/preprocess.py#L403))
32
32
33
33
- output_requirements: providing required fields for the output to be created,
34
-
taken from `list_output` structure;
35
-
it's a part of the `requires` field in metadata in pydra spec
34
+
taken from `list_output` structure (e.g. requirements for tissue_class_files [here](https://github.com/nipy/nipype/blob/f4343d6ddaee814aa16b197cc729a10d437990bf/nipype/interfaces/fsl/preprocess.py#L418));
35
+
it's a part of the `requires` field in metadata in pydra spec (e.g. [here](https://github.com/nipype/pydra-fsl/blob/ceae758f76bde81465e86cff029b40e334a7939a/pydra/tasks/fsl/preprocess/fast.py#L237))
36
36
37
37
- output_templates: providing template to create the output file name,
38
-
taken from `list_output` structure;
39
-
it is set as `output_file_template` in metadata
38
+
taken from `list_output` structure (e.g., [here](https://github.com/nipy/nipype/blob/f4343d6ddaee814aa16b197cc729a10d437990bf/nipype/interfaces/fsl/preprocess.py#L205));
39
+
it is set as `output_file_template` in metadata (e.g. [here](https://github.com/nipype/pydra-fsl/blob/ceae758f76bde81465e86cff029b40e334a7939a/pydra/tasks/fsl/preprocess/bet.py#L204))
40
40
41
41
- output_callables: providing function name that should be used to gather output,
42
42
based on the `list_output` structure and used only for `FAST`;
43
-
it is set as `callable` in metadata
43
+
it is set as `callable` in metadata (e.g. [here](https://github.com/nipype/pydra-fsl/blob/ceae758f76bde81465e86cff029b40e334a7939a/pydra/tasks/fsl/preprocess/fast.py#L237))
44
44
45
45
- tests_inputs, tests_outputs: specification for tests,
46
46
the fields should have the same length and each element should contain
0 commit comments