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Spike: determine what needs to be done to use "conda run" for tools in the extension. #7692

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@ericsnowcurrently

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@ericsnowcurrently

Basically, figure out what granular issues need to be created for #7425 and what files need to be changed for them.

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debtCovers everything internal: CI, testing, refactoring of the codebase, etc.

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