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output is
/home/wensi/anaconda3/envs/python35/lib/python3.5/site-packages/h5py/init.py:36: FutureWarning: Conversion of the second argument of issubdtype from float to np.floating is deprecated. In future, it will be treated as np.float64 == np.dtype(float).type.
from ._conv import register_converters as _register_converters
{'pkg_path': '/home/wensi/anaconda3/envs/python35/lib/python3.5/site-packages/nipype', 'networkx_version': '2.1', 'sys_version': '3.5.5 |Anaconda custom (64-bit)| (default, May 13 2018, 21:12:35) \n[GCC 7.2.0]', 'commit_source': 'archive substitution', 'nibabel_version': '2.3.0', 'commit_hash': '%h', 'sys_executable': '/home/wensi/anaconda3/envs/python35/bin/python', 'sys_platform': 'linux', 'numpy_version': '1.14.3', 'nipype_version': '1.1.0', 'scipy_version': '1.1.0', 'traits_version': '4.6.0'}
1.1.0
Execution environment
python 3.5
Choose one
Container [Tag: ???]
My python environment inside container [Base Tag: ???]
My python environment outside container
The text was updated successfully, but these errors were encountered:
it looks like you're missing one package pytest-xdist. You can pip install it (or skip the -n, as you did). And we should make sure that this is available in conda build. Thank you for letting us know!
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Summary
Run nipype.test(), shows
-c: error: unrecognized arguments: -n
Actual behavior
usage: -c [options] [file_or_dir] [file_or_dir] [...]
-c: error: unrecognized arguments: -n
inifile: /home/wensi/anaconda3/envs/python35/lib/python3.5/site-packages/nipype/pytest.ini
rootdir: /home/wensi/anaconda3/envs/python35/lib/python3.5/site-packages/nipype
Expected behavior
the test should be run with out error
How to replicate the behavior
just follow the two command lines on Anaconda nipype
then run
python -c "import nipype; nipype.test()"
Script/Workflow details
Please put URL to code or code here (if not too long).
Platform details:
Please paste the output of:
python -c "import nipype; print(nipype.get_info()); print(nipype.__version__)"
output is
/home/wensi/anaconda3/envs/python35/lib/python3.5/site-packages/h5py/init.py:36: FutureWarning: Conversion of the second argument of issubdtype from
float
tonp.floating
is deprecated. In future, it will be treated asnp.float64 == np.dtype(float).type
.from ._conv import register_converters as _register_converters
{'pkg_path': '/home/wensi/anaconda3/envs/python35/lib/python3.5/site-packages/nipype', 'networkx_version': '2.1', 'sys_version': '3.5.5 |Anaconda custom (64-bit)| (default, May 13 2018, 21:12:35) \n[GCC 7.2.0]', 'commit_source': 'archive substitution', 'nibabel_version': '2.3.0', 'commit_hash': '%h', 'sys_executable': '/home/wensi/anaconda3/envs/python35/bin/python', 'sys_platform': 'linux', 'numpy_version': '1.14.3', 'nipype_version': '1.1.0', 'scipy_version': '1.1.0', 'traits_version': '4.6.0'}
1.1.0
Execution environment
python 3.5
Choose one
The text was updated successfully, but these errors were encountered: