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lines changed Original file line number Diff line number Diff line change @@ -379,14 +379,15 @@ class GTMPVCInputSpec(FSTraitedSpec):
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)
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class GTMPVCOutputSpec (TraitedSpec ):
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pvc_dir = Directory (exists = True , desc = "output directory" )
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ref_file = File (exists = True , desc = "Reference TAC in .dat" )
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hb_nifti = File (exists = True , desc = "High-binding TAC in nifti" )
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hb_dat = File (exists = True , desc = "High-binding TAC in .dat" )
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nopvc_file = File (exists = True , desc = "TACs for all regions with no PVC" )
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gtm_file = File (exists = True , desc = "TACs for all regions with GTM PVC" )
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gtm_stats = File (exists = True , desc = "Statistics for the GTM PVC" )
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class GTMPVC (FSCommand ):
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"""create an anatomical segmentation for the geometric transfer matrix (GTM).
@@ -538,7 +539,7 @@ class LoganRefInputSpec(GLMFitInputSpec):
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)
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class LoganRefOutputSpec (GLMFitInputSpec ):
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- vd = File (desc = "BP estimates" )
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+ bp = File (desc = "BP estimates" )
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class LoganRef (GLMFit ):
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_cmd = "mri_glmfit"
@@ -553,5 +554,5 @@ def _list_outputs(self):
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ext = '.nii'
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else :
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ext = '.mgh'
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- outputs ['vd ' ] = os .join (self .inputs .glm_dir , 'vd ' + ext )
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+ outputs ['bp ' ] = os .join (self .inputs .glm_dir , 'bp ' + ext )
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return outputs
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