add specs that should have been added in #1631 and #1554

Author: oesteban

nipype/algorithms/tests/test_auto_CompCor.py

@@ -0,0 +1,38 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from ...testing import assert_equal
+from ..confounds import CompCor
+
+
+def test_CompCor_inputs():
+    input_map = dict(components_file=dict(mandatory=False,
+    usedefault=True,
+    ),
+    ignore_exception=dict(nohash=True,
+    usedefault=True,
+    ),
+    mask_file=dict(mandatory=False,
+    ),
+    num_components=dict(usedefault=True,
+    ),
+    realigned_file=dict(mandatory=True,
+    ),
+    regress_poly_degree=dict(usedefault=True,
+    ),
+    use_regress_poly=dict(usedefault=True,
+    ),
+    )
+    inputs = CompCor.input_spec()
+
+    for key, metadata in list(input_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(inputs.traits()[key], metakey), value
+
+
+def test_CompCor_outputs():
+    output_map = dict(components_file=dict(),
+    )
+    outputs = CompCor.output_spec()
+
+    for key, metadata in list(output_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(outputs.traits()[key], metakey), value

nipype/algorithms/tests/test_auto_TCompCor.py

@@ -0,0 +1,40 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from ...testing import assert_equal
+from ..confounds import TCompCor
+
+
+def test_TCompCor_inputs():
+    input_map = dict(components_file=dict(mandatory=False,
+    usedefault=True,
+    ),
+    ignore_exception=dict(nohash=True,
+    usedefault=True,
+    ),
+    mask_file=dict(mandatory=False,
+    ),
+    num_components=dict(usedefault=True,
+    ),
+    percentile_threshold=dict(usedefault=True,
+    ),
+    realigned_file=dict(mandatory=True,
+    ),
+    regress_poly_degree=dict(usedefault=True,
+    ),
+    use_regress_poly=dict(usedefault=True,
+    ),
+    )
+    inputs = TCompCor.input_spec()
+
+    for key, metadata in list(input_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(inputs.traits()[key], metakey), value
+
+
+def test_TCompCor_outputs():
+    output_map = dict(components_file=dict(),
+    )
+    outputs = TCompCor.output_spec()
+
+    for key, metadata in list(output_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(outputs.traits()[key], metakey), value

nipype/interfaces/semtools/brains/tests/test_auto_GenerateEdgeMapImage.py

@@ -0,0 +1,53 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from .....testing import assert_equal
+from ..utilities import GenerateEdgeMapImage
+
+
+def test_GenerateEdgeMapImage_inputs():
+    input_map = dict(args=dict(argstr='%s',
+    ),
+    environ=dict(nohash=True,
+    usedefault=True,
+    ),
+    ignore_exception=dict(nohash=True,
+    usedefault=True,
+    ),
+    inputMRVolumes=dict(argstr='--inputMRVolumes %s...',
+    ),
+    inputMask=dict(argstr='--inputMask %s',
+    ),
+    lowerPercentileMatching=dict(argstr='--lowerPercentileMatching %f',
+    ),
+    maximumOutputRange=dict(argstr='--maximumOutputRange %d',
+    ),
+    minimumOutputRange=dict(argstr='--minimumOutputRange %d',
+    ),
+    numberOfThreads=dict(argstr='--numberOfThreads %d',
+    ),
+    outputEdgeMap=dict(argstr='--outputEdgeMap %s',
+    hash_files=False,
+    ),
+    outputMaximumGradientImage=dict(argstr='--outputMaximumGradientImage %s',
+    hash_files=False,
+    ),
+    terminal_output=dict(nohash=True,
+    ),
+    upperPercentileMatching=dict(argstr='--upperPercentileMatching %f',
+    ),
+    )
+    inputs = GenerateEdgeMapImage.input_spec()
+
+    for key, metadata in list(input_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(inputs.traits()[key], metakey), value
+
+
+def test_GenerateEdgeMapImage_outputs():
+    output_map = dict(outputEdgeMap=dict(),
+    outputMaximumGradientImage=dict(),
+    )
+    outputs = GenerateEdgeMapImage.output_spec()
+
+    for key, metadata in list(output_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(outputs.traits()[key], metakey), value

nipype/interfaces/semtools/brains/tests/test_auto_GeneratePurePlugMask.py

@@ -0,0 +1,42 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from .....testing import assert_equal
+from ..utilities import GeneratePurePlugMask
+
+
+def test_GeneratePurePlugMask_inputs():
+    input_map = dict(args=dict(argstr='%s',
+    ),
+    environ=dict(nohash=True,
+    usedefault=True,
+    ),
+    ignore_exception=dict(nohash=True,
+    usedefault=True,
+    ),
+    inputImageModalities=dict(argstr='--inputImageModalities %s...',
+    ),
+    numberOfSubSamples=dict(argstr='--numberOfSubSamples %s',
+    sep=',',
+    ),
+    outputMaskFile=dict(argstr='--outputMaskFile %s',
+    hash_files=False,
+    ),
+    terminal_output=dict(nohash=True,
+    ),
+    threshold=dict(argstr='--threshold %f',
+    ),
+    )
+    inputs = GeneratePurePlugMask.input_spec()
+
+    for key, metadata in list(input_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(inputs.traits()[key], metakey), value
+
+
+def test_GeneratePurePlugMask_outputs():
+    output_map = dict(outputMaskFile=dict(),
+    )
+    outputs = GeneratePurePlugMask.output_spec()
+
+    for key, metadata in list(output_map.items()):
+        for metakey, value in list(metadata.items()):
+            yield assert_equal, getattr(outputs.traits()[key], metakey), value