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fix: randomise option formatting and removing vxl and vxf for now.
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nipype/interfaces/fsl/model.py

Lines changed: 3 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -1571,15 +1571,11 @@ class RandomiseInputSpec(FSLCommandInputSpec):
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f_cm_thresh = traits.Float(
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argstr='-S %.2f', desc='carry out f cluster-mass thresholding')
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tfce_H = traits.Float(
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argstr='--tfce_H %.2f', desc='TFCE height parameter (default=2)')
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argstr='--tfce_H=%.2f', desc='TFCE height parameter (default=2)')
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tfce_E = traits.Float(
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argstr='--tfce_E %.2f', desc='TFCE extent parameter (default=0.5)')
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argstr='--tfce_E=%.2f', desc='TFCE extent parameter (default=0.5)')
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tfce_C = traits.Float(
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argstr='--tfce_C %.2f', desc='TFCE connectivity (6 or 26; default=6)')
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vxl = traits.List(traits.Int, argstr='--vxl %d', desc='list of numbers indicating voxelwise EVs' +
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'position in the design matrix (list order corresponds to files in vxf option)')
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vxf = traits.List(traits.Int, argstr='--vxf %d', desc='list of 4D images containing voxelwise EVs' +
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'(list order corresponds to numbers in vxl option)')
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argstr='--tfce_C=%.2f', desc='TFCE connectivity (6 or 26; default=6)')
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class RandomiseOutputSpec(TraitedSpec):

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