Removed FSL PR from Camino PR

Author: mick-d

nipype/interfaces/camino/tests/test_auto_MESD.py

@@ -0,0 +1,62 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from nipype.testing import assert_equal
+from nipype.interfaces.camino.odf import MESD
+
+def test_MESD_inputs():
+    input_map = dict(args=dict(argstr='%s',
+    ),
+    bgmask=dict(argstr='-bgmask %s',
+    ),
+    environ=dict(nohash=True,
+    usedefault=True,
+    ),
+    fastmesd=dict(argstr='-fastmesd',
+    requires=['mepointset'],
+    ),
+    ignore_exception=dict(nohash=True,
+    usedefault=True,
+    ),
+    in_file=dict(argstr='-inputfile %s',
+    mandatory=True,
+    position=1,
+    ),
+    inputdatatype=dict(argstr='-inputdatatype %s',
+    ),
+    inverter=dict(argstr='-filter %s',
+    mandatory=True,
+    position=2,
+    ),
+    inverter_param=dict(argstr='%f',
+    mandatory=True,
+    position=3,
+    units='NA',
+    ),
+    mepointset=dict(argstr='-mepointset %d',
+    units='NA',
+    ),
+    out_file=dict(argstr='> %s',
+    genfile=True,
+    position=-1,
+    ),
+    scheme_file=dict(argstr='-schemefile %s',
+    mandatory=True,
+    ),
+    terminal_output=dict(mandatory=True,
+    nohash=True,
+    ),
+    )
+    inputs = MESD.input_spec()
+
+    for key, metadata in input_map.items():
+        for metakey, value in metadata.items():
+            yield assert_equal, getattr(inputs.traits()[key], metakey), value
+
+def test_MESD_outputs():
+    output_map = dict(mesd_data=dict(),
+    )
+    outputs = MESD.output_spec()
+
+    for key, metadata in output_map.items():
+        for metakey, value in metadata.items():
+            yield assert_equal, getattr(outputs.traits()[key], metakey), value
+

nipype/interfaces/camino/tests/test_auto_Shredder.py

@@ -0,0 +1,52 @@
+# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
+from nipype.testing import assert_equal
+from nipype.interfaces.camino.convert import Shredder
+
+def test_Shredder_inputs():
+    input_map = dict(args=dict(argstr='%s',
+    ),
+    chunksize=dict(argstr='%d',
+    position=2,
+    units='NA',
+    ),
+    environ=dict(nohash=True,
+    usedefault=True,
+    ),
+    ignore_exception=dict(nohash=True,
+    usedefault=True,
+    ),
+    in_file=dict(argstr='< %s',
+    mandatory=True,
+    position=-2,
+    ),
+    offset=dict(argstr='%d',
+    position=1,
+    units='NA',
+    ),
+    out_file=dict(argstr='> %s',
+    genfile=True,
+    position=-1,
+    ),
+    space=dict(argstr='%d',
+    position=3,
+    units='NA',
+    ),
+    terminal_output=dict(mandatory=True,
+    nohash=True,
+    ),
+    )
+    inputs = Shredder.input_spec()
+
+    for key, metadata in input_map.items():
+        for metakey, value in metadata.items():
+            yield assert_equal, getattr(inputs.traits()[key], metakey), value
+
+def test_Shredder_outputs():
+    output_map = dict(shredded=dict(),
+    )
+    outputs = Shredder.output_spec()
+
+    for key, metadata in output_map.items():
+        for metakey, value in metadata.items():
+            yield assert_equal, getattr(outputs.traits()[key], metakey), value
+

nipype/interfaces/fsl/maths.py

@@ -242,12 +242,11 @@ class SpatialFilter(MathsCommand):
 
 class UnaryMathsInput(MathsInput):
 
-    operation = traits.Enum("exp", "log", "sin", "cos", "tan", "asin", "acos", "atan", "sqr", "sqrt",
-                            "recip", "abs", "bin", "binv", "fillh", "fillh26", "index", "edge", "nan",
-                             "nanm", "rand", "randn", "range",
+    operation = traits.Enum("exp", "log", "sin", "cos", "sqr", "sqrt", "recip", "abs", "bin", "index",
                             argstr="-%s", position=4, mandatory=True,
                             desc="operation to perform")
 
+
 class UnaryMaths(MathsCommand):
     """Use fslmaths to perorm a variety of mathematical operations on an image.
 

nipype/testing/data/config.ini

@@ -0,0 +1,2 @@
+[BOOL]
+ManualNIfTIConv=0