diff --git a/conftest.py b/conftest.py
index bd2053b092..e0f059fa43 100644
--- a/conftest.py
+++ b/conftest.py
@@ -14,6 +14,8 @@
 
 from __future__ import annotations
 
+import warnings
+
 import numpy as np
 import pandas as pd
 import pyarrow as pa
@@ -21,6 +23,11 @@
 
 import bigframes._config
 
+# Make sure SettingWithCopyWarning is ignored if it exists.
+# It was removed in pandas 3.0.
+if hasattr(pd.errors, "SettingWithCopyWarning"):
+    warnings.simplefilter("ignore", pd.errors.SettingWithCopyWarning)
+
 
 @pytest.fixture(scope="session")
 def polars_session_or_bpd():
diff --git a/pytest.ini b/pytest.ini
index 75b69ce435..512fd81a7e 100644
--- a/pytest.ini
+++ b/pytest.ini
@@ -1,5 +1,3 @@
 [pytest]
 doctest_optionflags = NORMALIZE_WHITESPACE
-filterwarnings =
-    ignore::pandas.errors.SettingWithCopyWarning
 addopts = "--import-mode=importlib"