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A key component of this project involves analyzing the compression techniques used by Samtools/HTSlib and comparing them with ROOT's compression capabilities:
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BGZF (Blocked GZIP Format) in BAM Files
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I'll study the 64KB block architecture that enables random access while maintaining gzip compatibility
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Test the nine compression levels (1-9) to determine optimal settings for genomic data
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Analyze the multi-threading implementation for parallel compression/decompression
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+
#### BGZF (Blocked GZIP Format) in BAM Files
57
+
58
+
- I'll study the 64KB block architecture that enables random access while maintaining gzip compatibility
59
+
- Test the nine compression levels (1-9) to determine optimal settings for genomic data
60
+
- Analyze the multi-threading implementation for parallel compression/decompression
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