From 2f55c2aeadaf089552b8ec28b93419a02a011534 Mon Sep 17 00:00:00 2001
From: Dmitry Shemetov <dshemetov@ucdavis.edu>
Date: Fri, 31 Mar 2023 20:02:12 -0700
Subject: [PATCH 1/3] ci: add docs building and hosting

---
 .github/workflows/pkgdown.yml | 46 +++++++++++++++++++++++++++++++++++
 1 file changed, 46 insertions(+)
 create mode 100644 .github/workflows/pkgdown.yml

diff --git a/.github/workflows/pkgdown.yml b/.github/workflows/pkgdown.yml
new file mode 100644
index 00000000..1be533fa
--- /dev/null
+++ b/.github/workflows/pkgdown.yml
@@ -0,0 +1,46 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [dev]
+  pull_request:
+    branches: [dev]
+  release:
+    types: [published]
+  workflow_dispatch:
+
+name: pkgdown
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - uses: actions/checkout@v3
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::pkgdown, local::.
+          needs: website
+
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/github-pages-deploy-action@v4.4.1
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs
\ No newline at end of file

From fe7a20a0257fba305c716ee8d2f74bdc6160de40 Mon Sep 17 00:00:00 2001
From: Dmitry Shemetov <dshemetov@ucdavis.edu>
Date: Fri, 31 Mar 2023 20:05:35 -0700
Subject: [PATCH 2/3] docs: add link to docs in README

---
 README.md | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/README.md b/README.md
index b08d0dd5..180d1963 100644
--- a/README.md
+++ b/README.md
@@ -2,6 +2,10 @@
 
 [![License: MIT][mit-image]][mit-url] [![Github Actions][github-actions-image]][github-actions-url]
 
+## Documentation
+
+- [Package website](https://cmu-delphi.github.io/epidatr/)
+
 ## Install
 
 Install latest version using [`remotes`](https://cran.r-project.org/package=remotes) package

From 63d403385fd6567f3b5f32c0de3aa85b3207e6ea Mon Sep 17 00:00:00 2001
From: "Logan C. Brooks" <lcbrooks@andrew.cmu.edu>
Date: Wed, 5 Apr 2023 12:20:56 -0700
Subject: [PATCH 3/3] Use `usethis::use_github_action("pkgdown")` for pkgdown
 ci

rather than manually copying files. This should be easier to update.
---
 .github/.gitignore                              | 1 +
 .github/workflows/{pkgdown.yml => pkgdown.yaml} | 6 +++---
 2 files changed, 4 insertions(+), 3 deletions(-)
 create mode 100644 .github/.gitignore
 rename .github/workflows/{pkgdown.yml => pkgdown.yaml} (93%)

diff --git a/.github/.gitignore b/.github/.gitignore
new file mode 100644
index 00000000..2d19fc76
--- /dev/null
+++ b/.github/.gitignore
@@ -0,0 +1 @@
+*.html
diff --git a/.github/workflows/pkgdown.yml b/.github/workflows/pkgdown.yaml
similarity index 93%
rename from .github/workflows/pkgdown.yml
rename to .github/workflows/pkgdown.yaml
index 1be533fa..087f0b05 100644
--- a/.github/workflows/pkgdown.yml
+++ b/.github/workflows/pkgdown.yaml
@@ -2,9 +2,9 @@
 # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches: [dev]
+    branches: [main, master]
   pull_request:
-    branches: [dev]
+    branches: [main, master]
   release:
     types: [published]
   workflow_dispatch:
@@ -43,4 +43,4 @@ jobs:
         with:
           clean: false
           branch: gh-pages
-          folder: docs
\ No newline at end of file
+          folder: docs