Call Pkg.resolve() before hashing Manifest (#519)

* Update Manifest

* Call resolve() in preview/publish workflows

Closes #518

* Add GHA workflow to resolve Manifest file

* Prefix cache path with `./`

cf. actions/cache#1361

Author: penelopeysm

.github/workflows/preview.yml

@@ -22,8 +22,9 @@ jobs:
         with:
           version: '1.10'
 
+      # Note: needs resolve() to fix #518
       - name: Instantiate Julia environment
-        run: julia --project=. -e 'using Pkg; Pkg.instantiate()'
+        run: julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.resolve()'
 
       - name: Set up Quarto
         uses: quarto-dev/quarto-actions/setup@v2
@@ -33,7 +34,7 @@ jobs:
         uses: actions/cache/restore@v4
         with:
           path: |
-            _freeze/
+            ./_freeze/
           key: ${{ runner.os }}-${{ hashFiles('**/Manifest.toml') }}
 
       - name: Render Quarto site
@@ -44,7 +45,7 @@ jobs:
         uses: actions/cache/save@v4
         with:
           path: |
-            _freeze/
+            ./_freeze/
           key: ${{ runner.os }}-${{ hashFiles('**/Manifest.toml') }}
 
       - name: Deploy to GitHub Pages

.github/workflows/publish.yml

@@ -20,8 +20,9 @@ jobs:
         with:
           version: '1.10'
 
+      # Note: needs resolve() to fix #518
       - name: Instantiate Julia environment
-        run: julia --project=. -e 'using Pkg; Pkg.instantiate()'
+        run: julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.resolve()'
 
       - name: Set up Quarto
         uses: quarto-dev/quarto-actions/setup@v2
@@ -34,7 +35,7 @@ jobs:
         uses: actions/cache/restore@v4
         with:
           path: |
-            _freeze/
+            ./_freeze/
           key: ${{ runner.os }}-${{ hashFiles('**/Manifest.toml') }}
 
       - name: Extract version from _quarto.yml
@@ -75,7 +76,7 @@ jobs:
         uses: actions/cache/save@v4
         with:
           path: |
-            _freeze/
+            ./_freeze/
           key: ${{ runner.os }}-${{ hashFiles('**/Manifest.toml') }}
 
       - name: Fetch search_original.json from main site

.github/workflows/resolve_manifest.yml

@@ -0,0 +1,48 @@
+# This action runs Pkg.instantiate() and Pkg.resolve() every time the master
+# branch is pushed to. If this leads to a change in the Manifest.toml file, it
+# will open a PR to update the Manifest.toml file. This ensures that the
+# contents of the Manifest in the repository are consistent with the contents
+# of the Manifest used by the CI system (i.e. during the actual docs
+# generation).
+#
+# See https://github.com/TuringLang/docs/issues/518 for motivation.
+
+name: Resolve Manifest
+on:
+  push:
+    branches:
+      - master
+  workflow_dispatch:
+
+jobs:
+  check-version:
+    runs-on: ubuntu-latest
+
+    permissions:
+      contents: write
+      pull-requests: write
+
+    env:
+      # Disable precompilation as it takes a long time and is not needed for this workflow
+      JULIA_PKG_PRECOMPILE_AUTO: 0
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Setup Julia
+        uses: julia-actions/setup-julia@v2
+        
+      - name: Instantiate and resolve
+        run: |
+          julia -e 'using Pkg; Pkg.instantiate(); Pkg.resolve()'
+
+      - name: Open PR
+        id: create_pr
+        uses: peter-evans/create-pull-request@v6
+        with:
+          branch: resolve-manifest
+          add-paths: Manifest.toml
+          commit-message: "Update Manifest.toml"
+          body: "This PR is automatically generated by the `resolve_manifest.yml` GitHub Action."
+          title: "Update Manifest.toml to match CI environment"

Manifest.toml

@@ -1,6 +1,6 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.10.4"
+julia_version = "1.10.5"
 manifest_format = "2.0"
 project_hash = "e0661388214f9e03749b3fccc86939dfd3853246"
 
@@ -3328,7 +3328,7 @@ version = "0.15.2+0"
 [[deps.libblastrampoline_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
-version = "5.8.0+1"
+version = "5.11.0+0"
 
 [[deps.libdecor_jll]]
 deps = ["Artifacts", "Dbus_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pango_jll", "Wayland_jll", "xkbcommon_jll"]